If you have a soft spot for breakfast treats that blend comfort and wholesomeness, these Deliciously Soft Apple Cinnamon Greek Yogurt Muffins will steal your heart (and taste buds). Each bite offers a delightful harmony of tender apple chunks, warm cinnamon, a kiss of vanilla, and incredible moisture thanks to Greek yogurt. It’s the kind of recipe you’ll want to keep on repeat, whether you’re prepping a cozy weekend brunch or grabbing a quick snack between tasks. Trust me, you’ll fall in love with the bakery-style crumb and how easy it is to bring these cheerful muffins to life in your own kitchen.

Ingredients You’ll Need
One of the best parts about these Deliciously Soft Apple Cinnamon Greek Yogurt Muffins is that the ingredients are simple staples—nothing fussy, just pure flavor and texture in every bite. Each one plays a crucial role, making these muffins incredibly irresistible while keeping the prep straightforward for busy mornings.
- All-purpose flour: Provides the structure for these soft, fluffy muffins and keeps them tender.
- Baking powder: Lifts the batter for that pretty bakery-style muffin dome.
- Baking soda: Works alongside the yogurt for extra rise and lightness.
- Ground cinnamon: The warming spice that infuses each muffin with cozy, comforting notes.
- Nutmeg (optional): Adds subtle depth and an extra whisper of autumn flavor.
- Salt: Brightens and balances all the sweet and spiced flavors.
- Brown sugar: Gives caramel-like richness and a hint of moisture.
- Granulated sugar: Sweetens just enough without overpowering the apples.
- Large eggs: Bind everything together and add extra richness.
- Melted butter or coconut oil: Keeps the muffins moist, with a touch of buttery (or coconut) flavor.
- Greek yogurt (plain or vanilla): The secret creamy ingredient for ultra-soft, tender muffins—plus a protein boost!
- Vanilla extract: Elevates the flavor and brings out the apple and spice notes.
- Diced apples: Use honeycrisp or gala for juicy bite and the perfect texture in every mouthful.
- Brown sugar & cinnamon (optional topping): Sprinkled on top for a sweet, crunchy finish that everyone loves.
How to Make Deliciously Soft Apple Cinnamon Greek Yogurt Muffins
Step 1: Prep Your Pan and Oven
Get started by preheating your oven to 350°F (175°C). This ensures your muffins rise evenly from the second they enter the oven. Take out a 12-cup muffin pan and line it with muffin liners or give it a light greasing—anything that helps those muffin tops pop right out when they’re ready!
Step 2: Mix the Dry Ingredients
In a large mixing bowl, whisk together your flour, baking powder, baking soda, cinnamon, nutmeg (if using), and salt. Blending the dry ingredients thoroughly now ensures all the flavors and leaveners are evenly distributed, setting the foundation for pillowy, soft muffins.
Step 3: Whisk the Wet Ingredients
In a separate, medium bowl, combine the eggs, both sugars, melted butter (or coconut oil), Greek yogurt, and vanilla extract. Whisk until the mixture is completely smooth and glossy—this is where the luscious texture of Deliciously Soft Apple Cinnamon Greek Yogurt Muffins begins to take shape!
Step 4: Combine Wet and Dry Mixes
Pour your wet ingredients into the bowl with your dry ingredients. Using a spatula or large spoon, gently mix until everything is just combined—overmixing is the enemy of tender muffins, so a few streaks of flour are just fine at this stage.
Step 5: Fold in the Apples
Gently fold the diced apples into the batter, distributing those juicy bits as evenly as possible. The apples add bursts of sweetness and keep the inside of these muffins moist and flavorful.
Step 6: Fill and Top the Muffin Cups
Spoon the batter evenly among the prepared muffin cups, filling each about three-quarters full. For an irresistible crunch and sparkle, sprinkle each mound with the optional brown sugar and cinnamon topping.
Step 7: Bake to Perfection
Bake your muffins for 18–22 minutes, or until a toothpick inserted in the center comes out clean or with just a few moist crumbs. Let them cool in the pan for 5 minutes to set, then transfer to a wire rack to finish cooling—and inhale that delightful apple cinnamon aroma!
How to Serve Deliciously Soft Apple Cinnamon Greek Yogurt Muffins

Garnishes
For that perfect bakery finish, try dusting your Deliciously Soft Apple Cinnamon Greek Yogurt Muffins with a light sprinkle of powdered sugar, a dollop of whipped cream, or a drizzle of simple vanilla glaze. Even a few extra apple slices or a pinch of extra cinnamon on top makes them feel extra special for brunch or gatherings.
Side Dishes
Pair these muffins with a creamy Greek yogurt parfait, sliced seasonal fruit, or a mug of your favorite coffee or tea. If you’re rounding out a big weekend brunch, they taste amazing next to scrambled eggs or a fresh, citrusy salad to balance the sweet and spiced notes.
Creative Ways to Present
Try arranging your Deliciously Soft Apple Cinnamon Greek Yogurt Muffins in a rustic basket lined with a linen napkin, or serve them on a pretty cake stand piled high for a festive touch. For a quick grab-and-go breakfast, wrap each muffin in parchment and tie with twine—they’ll look irresistibly inviting and homemade.
Make Ahead and Storage
Storing Leftovers
Muffins stay wonderfully fresh when stored in an airtight container at room temperature for up to 3–4 days. Be sure to let them cool completely before sealing them up, which keeps that tender crumb and prevents any soggy bottoms.
Freezing
Deliciously Soft Apple Cinnamon Greek Yogurt Muffins freeze beautifully. Let completely cooled muffins rest on a baking sheet in the freezer for an hour, then transfer to a resealable bag or container. They’ll hold up for up to two months—just thaw overnight when you need a quick, homemade treat.
Reheating
To bring frozen muffins back to bakery-fresh glory, simply microwave them for about 20–30 seconds or warm in a 300°F oven for a few minutes. This softens the crumb and revives that fresh-baked aroma you can’t resist!
FAQs
Can I use whole wheat flour instead of all-purpose?
Absolutely! For a heartier texture and extra fiber, swap half the all-purpose flour for whole wheat. You’ll get slightly nuttier flavor and all the wholesome goodness, while still keeping your Deliciously Soft Apple Cinnamon Greek Yogurt Muffins tender and moist.
What kind of apples should I use?
For the best results, go for firm, flavorful varieties like honeycrisp or gala. They hold their shape, add juicy bites throughout each muffin, and balance the cinnamon sweetness beautifully.
Is there a dairy-free alternative to Greek yogurt?
You can definitely make this recipe dairy-free by choosing a plant-based yogurt with a texture similar to Greek yogurt. Coconut or almond milk yogurts work well, but make sure to pick unsweetened if possible so your muffins aren’t overly sweet.
Can I add nuts or raisins?
Of course! Chopped walnuts, pecans, or a handful of golden raisins are delicious additions. Just fold about 1/3 cup in with the apples for extra crunch or bursts of sweetness in your Deliciously Soft Apple Cinnamon Greek Yogurt Muffins.
How do I know when my muffins are done baking?
Your muffins are perfectly baked when a toothpick inserted in the center of one comes out clean (a few moist crumbs are okay). The tops should have a lovely golden hue, and they’ll spring back lightly when pressed with your fingertip.
Final Thoughts
If you’re craving bakery vibes from the comfort of home, it’s time to treat yourself to a batch of Deliciously Soft Apple Cinnamon Greek Yogurt Muffins. They’re the perfect mix of wholesome and satisfying, sure to brighten up your mornings or snack breaks. Gather your ingredients and give these muffins a try—you’ll be amazed at how quickly they become a new household favorite!
Print
Deliciously Soft Apple Cinnamon Greek Yogurt Muffins Recipe
- Total Time: 30 mins
- Yield: 12 muffins
- Diet: Vegetarian
Description
Tender, bakery-style muffins bursting with apple chunks, cinnamon, and a hint of vanilla — made extra moist with creamy Greek yogurt. These Apple Cinnamon Greek Yogurt Muffins are a wholesome, irresistible breakfast treat.
Ingredients
For the Muffins:
- 1 ¾ cups all-purpose flour
- 1 tsp baking powder
- ½ tsp baking soda
- 1 ½ tsp ground cinnamon
- ¼ tsp nutmeg (optional)
- ¼ tsp salt
- ½ cup brown sugar
- ¼ cup granulated sugar
- 2 large eggs
- ⅓ cup melted butter or coconut oil
- ¾ cup Greek yogurt (plain or vanilla)
- 1 tsp vanilla extract
- 1 ½ cups diced apples (peeled and chopped, about 2 medium)
Optional Topping:
- 2 tbsp brown sugar
- ¼ tsp cinnamon
Instructions
- Preheat oven to 350°F (175°C). Line or grease a 12-cup muffin pan.
- In a large bowl, whisk together flour, baking powder, baking soda, cinnamon, nutmeg, and salt.
- In a medium bowl, whisk eggs, sugars, melted butter, Greek yogurt, and vanilla until smooth.
- Add wet ingredients to dry ingredients and mix until just combined (do not overmix).
- Fold in diced apples.
- Divide batter evenly among muffin cups (about ¾ full).
- If desired, sprinkle each with the brown sugar–cinnamon topping.
- Bake for 18–22 minutes, or until a toothpick inserted in the center comes out clean.
- Cool in pan 5 minutes, then transfer to a wire rack.
Notes
- Substitute half whole-wheat flour for extra fiber.
- Use honeycrisp or gala apples for best texture.
- Store in an airtight container for 3–4 days, or freeze up to 2 months.
- Prep Time: 10 mins
- Cook Time: 20 mins
- Category: Breakfast / Snack / Healthy Baking
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 235
- Sugar: 16g
- Sodium: 189mg
- Fat: 9g
- Saturated Fat: 5g
- Unsaturated Fat: 3g
- Trans Fat: 0g
- Carbohydrates: 35g
- Fiber: 2g
- Protein: 4g
- Cholesterol: 56mg